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Shivam Singh

M.Sc. Bioinformatics student · Computational Biology & Structural Bioinformatics

Prayagraj, Uttar Pradesh, India

@shivamshivam11201

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🎓 M.Sc. Bioinformatics at Central University of Himachal Pradesh · Graduating 2026

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About

Bioinformatics postgraduate with hands-on research experience in molecular docking, molecular dynamics simulation, virtual screening, and NGS analysis. Interested in applying computational and data-driven methods to structural bioinformatics and drug discovery research.

Experience

  • Thesis Researcher
    Central University of Himachal Pradesh
    2025 – 2026

    Comparative analysis of commercially available algorithms in molecular docking under Prof. Mahesh Kulharia. Benchmarked PSOVina against AutoDock Vina for virtual screening of the CXCR4 receptor; conducted large-scale virtual screening of approximately 123,000 compounds from the COCONUT natural product database; built post-docking analysis pipelines including drug-likeness filtering, chemical space visualization, Tanimoto similarity, consensus ranking, and enrichment metrics; validated top-ranked hits through molecular dynamics simulations and MM-PBSA/MM-GBSA binding free energy calculations.

Education

  • M.Sc. Bioinformatics
    Central University of Himachal Pradesh
    Bioinformatics · 2024 – 2026
  • B.Sc. Life Science
    Ewing Christian College
    Life Sciences · 2021 – 2024
  • Intermediate
    Ewing Christian Public School
    2021
  • High School
    Ewing Christian Public School
    2019

Skills

2 to 5 years 2 to 5 years Several years of experience.
Molecular Docking molecular dynamics simulations
<3 months <3 months Just getting started - under three months. This is also what shows when a level has not been set.
Python R Studio Structural bioinformatics

Tools / apps / platforms

2 to 5 years 2 to 5 years Several years of experience.
PyMOL GROMACS

🎯 Hobbies & interests

  • Gaming
  • Singing
  • Reading

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